plotFidelity

Plots the selected SOI isotopic profile and a comparison with its theoretical abundances calculated from the molecular formula.

plotFidelity(struct, id, entry, plot = TRUE)

# S4 method for RHermesExp,numeric,numeric
plotFidelity(struct, id, entry, plot = TRUE)

Arguments

struct	An RHermesExp object.
id	Number of the SOI to plot.
entry	The SOI entry to check.
plot	Default to TRUE. The parameter is used for consistency with the function internal use in filterSOI(). If set to FALSE, returns some statistics about the isotopic fidelity.

Value

An interactive plot_ly object. If plot set to FALSE, returns a list of isotopic fidelity metrics.

See also

Other plots: plotRawMS2(), plotSOI(), plotSS()

Author

Roger Gine

Examples

struct <- readRDS(system.file("extdata", "exampleObject.rds",
                             package = "RHermes"))
p <- plotFidelity(struct, 1, 9)